PXD003624 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Identification of BNC2 interactors in human LX2 cells using RIME |
Description | The goal of this study was to use Rapid Immunoprecipitation Mass spectrometry of Endogenous protein (RIME) assays (Mohammed et al., 2016) to identify transcriptional regulatory partners of the transcription factor BNC2 in LX2 cells. Protein complexes were immune-precipitated with an anti-BNC2 antibody (55220-1-AP, Proteintech) or control non-immune IgG (normal rabbit IgG #2729, Cell Signaling) before being subjected to MS. |
HostingRepository | PRIDE |
AnnounceDate | 2022-08-05 |
AnnouncementXML | Submission_2022-08-05_07:59:12.769.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD003624 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Jean-Marc STRUB |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | timsTOF Pro |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2016-02-12 03:30:12 | ID requested | |
⏵ 1 | 2022-08-05 07:59:13 | announced | |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: Rapid immunoprecipitation mass spectrometry of endogenous proteins (RIME) |
human |
LX2 |
hepatic stellate cells |
BNC2 |
Contact List
Strub Jean-Marc |
contact affiliation | Laboratoire de Spectrométrie de Masse Bio-Organique Département des Sciences Analytiques, Institut Pluridisciplinaire Hubert Curien, UMR 7178 (CNRS-UdS) ECPM, Bat. R5-N0, 25 rue Becquerel F67087-Strasbourg-Cedex 2 |
contact email | jmstrub@unistra.fr |
lab head | |
Jean-Marc STRUB |
contact affiliation | CNRS |
contact email | jmstrub@unistra.fr |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/08/PXD003624 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD003624
- Label: PRIDE project
- Name: Identification of BNC2 interactors in human LX2 cells using RIME