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PXD002131

PXD002131 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleFranco-Swiss HPP project (Chromosomes 2 and 14)
DescriptionThe dataset is a concatenation of nanoLC-MS/MS analyses performed on different sample types/sample preparations of human proteins on various instrumental platforms in the laboratory. A franco-swiss collaboration to identify missing human proteins on chromosomes 2 and 14 in the frame of the Human Proteome Project, set up a bioinformatic screen over all datasets accumulated in the laboratory in order to detect proteins classified as “missing” by NextProt.
HostingRepositoryPRIDE
AnnounceDate2015-07-17
AnnouncementXMLSubmission_2015-07-17_07:00:22.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterEmmanuelle Mouton Barbosa
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListS-carboxamidoethyl-L-cysteine; deamidated residue; iTRAQ8plex-116 reporter+balance reagent acylated residue; acetylated residue
InstrumentQ Exactive; LTQ Orbitrap Velos
Dataset History
RevisionDatetimeStatusChangeLog Entry
02015-05-01 01:51:38ID requested
12015-07-17 07:00:24announced
Publication List
Carapito C, Lane L, Benama M, Opsomer A, Mouton-Barbosa E, Garrigues L, Gonzalez de Peredo A, Burel A, Bruley C, Gateau A, Bouyssié D, Jaquinod M, Cianferani S, Burlet-Schiltz O, Van Dorsselaer A, Garin J, Vandenbrouck Y, Computational and Mass-Spectrometry-Based Workflow for the Discovery and Validation of Missing Human Proteins: Application to Chromosomes 2 and 14. J Proteome Res, 14(9):3621-34(2015) [pubmed]
Keyword List
ProteomeXchange project tag: Chromosome-centric Human Proteome Project (C-HPP), Human Proteome Project
submitter keyword: Homo sapiens (Human)
Contact List
Odile Bruley Schiltz
contact affiliationCNRS UMR5089 Institut de Pharmacologie et de Biologie Structurale Université de Toulouse Laboratoire de Spectrométrie de Masse BioOrganique (LSMBO), IPHC, Université de Strasbourg CEA, DSV, iRTSV, Laboratoire de Biologie à Grande Echelle, INSERM U1038, Université de Grenoble
contact emailemmanuelle.mouton@ipbs.fr
lab head
Emmanuelle Mouton Barbosa
contact affiliationIPBS CNRS
contact emailemmanuelle.mouton@ipbs.fr
dataset submitter
Full Dataset Link List
Dataset FTP location
PRIDE project URI
Repository Record List
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