PXD001083 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Transitional Surfaceomics: Identification of Planococcus halocryophilus Surface-Associated Proteins During Optimal and Sub-Zero Growth |
Description | During sub-zero (cryophilic) growth, nodular features appear on the cell surface of Planococcus halocryophilus; however, the biochemical composition of these features as well as any cold-adaptive benefits they may offer are not understood. This study aimed to identify differences in the surfaceome of P. halocryophilus cells grown under optimal (24°C) and sub-zero (-5°C and -10°C) culture conditions, for the purpose of gaining insight into cold-adapted proteomic traits at the cell surface. |
HostingRepository | PRIDE |
AnnounceDate | 2019-06-04 |
AnnouncementXML | Submission_2019-06-04_07:45:58.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD001083 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Marybeth Creskey |
SpeciesList | scientific name: Planococcus halocryophilus Or1; NCBI TaxID: 1005941; |
ModificationList | Deamidated; Oxidation |
Instrument | Synapt MS |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2014-06-24 05:02:48 | ID requested | |
⏵ 1 | 2019-06-04 07:45:59 | announced | |
Publication List
Ronholm J, Raymond-Bouchard I, Creskey M, Cyr T, Cloutis EA, Whyte LG, Characterizing the surface-exposed proteome of Planococcus halocryophilus during cryophilic growth. Extremophiles, 19(3):619-29(2015) [pubmed] |
Keyword List
curator keyword: Biological |
submitter keyword: surfaceome, cryophile, halophile, Planococcus halocryophilus |
Contact List
Terry D. Cyr |
contact affiliation | Biologics and Genetic Therapies Directorate, Health Canada |
contact email | terry.cyr@hc-sc.gc.ca |
lab head | |
Marybeth Creskey |
contact affiliation | Health Canada |
contact email | marybeth.creskey@hc-sc.gc.ca |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/06/PXD001083 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD001083
- Label: PRIDE project
- Name: Transitional Surfaceomics: Identification of Planococcus halocryophilus Surface-Associated Proteins During Optimal and Sub-Zero Growth