<<< Full experiment listing

PXD000703-2

PXD000703 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleProteomic Analysis of Artemisia annua
DescriptionThere is growing interest to apply proteomics to other organisms than just the biomedically relevant and important species such as human, mouse or rat. However, one of the main hurdles for successful application of proteomics to the organism of interest is still the availability of a well annotated and curated (genomic) database that can be used to search the (mainly MS-based) proteomic data for protein identification. Thus, the field of proteogenomics is increasingly becoming important with the aim to support the annotation of genomic sequence data by exploiting the information that is obtained through proteomics from the identification and characterization of the actual gene products/expression. Here, we have studied the organism Artemisia annua, which is a Chinese medicinal plant endemic to northern parts of China. A. annua is crucial to world health programs as it is currently the sole source for biosynthetically produced artemisinin, the anitmalarial pro-drug compound that has been the last line of defence against malaria for decades.
HostingRepositoryPRIDE
AnnounceDate2015-07-10
AnnouncementXMLSubmission_2015-07-10_00:30:27.xml
DigitalObjectIdentifierhttps://dx.doi.org/10.6019/PXD000703
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportSupported dataset by repository
PrimarySubmitterRainer Cramer
SpeciesList scientific name: Artemisia annua (Sweet wormwood); NCBI TaxID: 35608;
ModificationListmonohydroxylated residue; iodoacetamide derivatized residue
InstrumentLTQ Orbitrap
Dataset History
RevisionDatetimeStatusChangeLog Entry
02014-01-22 02:04:31ID requested
12015-07-08 03:53:12announced
22015-07-10 00:30:28announcedUpdated project metadata.
32015-07-11 00:30:51announcedUpdated project metadata.
Publication List
Dataset with its publication pending
Keyword List
curator keyword: Biological
submitter keyword: Artemisia annua, proteomics, Label Free Quantitation, EMPAI
Contact List
Rainer Cramer
contact affiliationDepartment of Chemistry, University of Reading, UK
contact emailr.k.cramer@reading.ac.uk
lab head
Rainer Cramer
contact affiliationChemistry
contact emailr.k.cramer@reading.ac.uk
dataset submitter
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/07/PXD000703
PRIDE project URI
Repository Record List
[ + ]