PXD000673 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Psychroflexus torquis 1D LC/MS |
Description | Proteorhodopsin has been an ongoing hot topic for the past decade. However the complete physiological role of this extremely widely distributed protein remains mysterious. In this study we aim to give an insight to the physiology of a proteorhodopsin-containing sea ice bacteria – Psychroflexus torquis using gel-free label-free proteomic approach for the first time. We also addressed the life strategy that used by this organism to successfully inhabit extreme sea ice environment. |
HostingRepository | PRIDE |
AnnounceDate | 2018-02-14 |
AnnouncementXML | Submission_2018-02-14_02:00:52.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Shi Feng |
SpeciesList | scientific name: Psychroflexus torquis (strain ATCC 700755 / ACAM 623); NCBI TaxID: 313595; |
ModificationList | iodoacetamide derivatized residue |
Instrument | LTQ Orbitrap |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2014-01-08 02:45:24 | ID requested | |
1 | 2015-07-24 08:38:17 | announced | |
2 | 2018-02-14 00:53:27 | announced | Updated project metadata. |
⏵ 3 | 2018-02-14 02:00:53 | announced | Updated project metadata. |
Publication List
Feng S, Powell SM, Wilson R, Bowman JP, Proteomic Insight into Functional Changes of Proteorhodopsin-Containing Bacterial Species Psychroflexus torquis under Different Illumination and Salinity Levels. J Proteome Res, 14(9):3848-58(2015) [pubmed] |
Keyword List
curator keyword: Biological |
submitter keyword: Psychroflexus torquis, sea ice, proteorhodopsin, salinity, 1D LC/MS |
Contact List
John Philip Bowman |
contact affiliation | Food Safety Centre, Tasmanian Institute of Agriculture, University of Tasmania, Sandy Bay, Hobart, Tasmania, Australia |
contact email | john.bowman@utas.edu.au |
lab head | |
Shi Feng |
contact affiliation | Food Safety Centre |
contact email | sfeng@utas.edu.au |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/07/PXD000673 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD000673
- Label: PRIDE project
- Name: Psychroflexus torquis 1D LC/MS