PXD000673

PXD000673 is an original dataset announced via ProteomeXchange.

Title	Psychroflexus torquis 1D LC/MS
Description	Proteorhodopsin has been an ongoing hot topic for the past decade. However the complete physiological role of this extremely widely distributed protein remains mysterious. In this study we aim to give an insight to the physiology of a proteorhodopsin-containing sea ice bacteria – Psychroflexus torquis using gel-free label-free proteomic approach for the first time. We also addressed the life strategy that used by this organism to successfully inhabit extreme sea ice environment.
HostingRepository	PRIDE
AnnounceDate	2018-02-14
AnnouncementXML	Submission_2018-02-14_02:00:52.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Shi Feng
SpeciesList	scientific name: Psychroflexus torquis (strain ATCC 700755 / ACAM 623); NCBI TaxID: 313595;
ModificationList	iodoacetamide derivatized residue
Instrument	LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2014-01-08 02:45:24	ID requested
1	2015-07-24 08:38:17	announced
2	2018-02-14 00:53:27	announced	Updated project metadata.
⏵ 3	2018-02-14 02:00:53	announced	Updated project metadata.

Feng S, Powell SM, Wilson R, Bowman JP, Proteomic Insight into Functional Changes of Proteorhodopsin-Containing Bacterial Species Psychroflexus torquis under Different Illumination and Salinity Levels. J Proteome Res, 14(9):3848-58(2015) [pubmed]

curator keyword: Biological

submitter keyword: Psychroflexus torquis, sea ice, proteorhodopsin, salinity, 1D LC/MS

John Philip Bowman
contact affiliation	Food Safety Centre, Tasmanian Institute of Agriculture, University of Tasmania, Sandy Bay, Hobart, Tasmania, Australia
contact email	john.bowman@utas.edu.au
lab head
Shi Feng
contact affiliation	Food Safety Centre
contact email	sfeng@utas.edu.au
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/07/PXD000673

PRIDE project URI

• PRIDE
  1. PXD000673
     1. Label: PRIDE project
     2. Name: Psychroflexus torquis 1D LC/MS