PXD000404-2

PXD000404 is an original dataset announced via ProteomeXchange.

Title	Comparative Proteome Profiling of Bovine and Human Staphylococcus epidermidis Strains to Search for Cell-surface Bound Factors with Plausible Roles in Virulence or Adaptation
Description	Here, we analyse two SE strains, an infectious bovine strain PM221 isolated from persistent subclinical bovine IMI, and ATCC12228 representing a low-infectious human skin strain, on total proteome level.
HostingRepository	PRIDE
AnnounceDate	2014-06-10
AnnouncementXML	Submission_2014-06-16_00:50:05.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Pia Siljamaki
SpeciesList	scientific name: Staphylococcus epidermidis; NCBI TaxID: 1282;
ModificationList	No PTMs are included in the dataset
Instrument	QSTAR Elite

Revision	Datetime	Status	ChangeLog Entry
0	2013-08-07 01:18:26	ID requested
1	2014-06-10 08:14:19	announced
⏵ 2	2014-06-16 00:50:07	announced	Updated publication reference for PubMed record(s): 24909406.
3	2014-07-24 03:49:24	announced	Updated project metadata.

Siljam, ä, ki P, Varmanen P, Kankainen M, Py, ö, r, ä, l, ä S, Karonen T, Iivanainen A, Auvinen P, Paulin L, Laine PK, Taponen S, Simojoki H, Sukura A, Nyman TA, Savijoki K, Comparative proteome profiling of bovine and human Staphylococcus epidermidis strains for screening specifically expressed virulence and adaptation proteins. Proteomics, 14(16):1890-4(2014) [pubmed]

submitter keyword: Staphylococcus epidermidis / Surfome / GeLC-MS/MS / Adaptation / Host-specificity

Tuula A Nyman
contact affiliation	Institute of Biotechnology, Proteomic Unit, University of Helsinki, Finland
contact email	tuula.nyman@helsinki.fi
lab head
Pia Siljamaki
contact affiliation	Institute of Biotechnology
contact email	pia.siljamaki@helsinki.fi
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2014/06/PXD000404

PRIDE project URI

• PRIDE
  1. PXD000404
     1. Label: PRIDE project
     2. Name: Comparative Proteome Profiling of Bovine and Human Staphylococcus epidermidis Strains to Search for Cell-surface Bound Factors with Plausible Roles in Virulence or Adaptation