PXD000404 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Comparative Proteome Profiling of Bovine and Human Staphylococcus epidermidis Strains to Search for Cell-surface Bound Factors with Plausible Roles in Virulence or Adaptation |
Description | Here, we analyse two SE strains, an infectious bovine strain PM221 isolated from persistent subclinical bovine IMI, and ATCC12228 representing a low-infectious human skin strain, on total proteome level. |
HostingRepository | PRIDE |
AnnounceDate | 2014-07-24 |
AnnouncementXML | Submission_2014-07-24_03:49:23.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Pia Siljamäki |
SpeciesList | scientific name: Staphylococcus epidermidis; NCBI TaxID: 1282; |
ModificationList | No PTMs are included in the dataset |
Instrument | QSTAR |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2013-08-07 01:18:26 | ID requested | |
1 | 2014-06-10 08:14:19 | announced | |
2 | 2014-06-16 00:50:07 | announced | Updated publication reference for PubMed record(s): 24909406. |
⏵ 3 | 2014-07-24 03:49:24 | announced | Updated project metadata. |
Publication List
Siljam, ä, ki P, Varmanen P, Kankainen M, Py, ö, r, ä, l, ä S, Karonen T, Iivanainen A, Auvinen P, Paulin L, Laine PK, Taponen S, Simojoki H, Sukura A, Nyman TA, Savijoki K, Comparative proteome profiling of bovine and human Staphylococcus epidermidis strains for screening specifically expressed virulence and adaptation proteins. Proteomics, 14(16):1890-4(2014) [pubmed] |
Keyword List
curator keyword: Biomedical, Biological |
submitter keyword: Staphylococcus epidermidis / Surfome / GeLC-MS/MS / Adaptation / Host-specificity |
Contact List
Tuula A Nyman |
contact affiliation | Institute of Biotechnology, Proteomic Unit, University of Helsinki, Finland |
contact email | tuula.nyman@helsinki.fi |
lab head | |
Pia Siljamäki |
contact affiliation | Institute of Biotechnology |
contact email | pia.siljamaki@helsinki.fi |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2014/06/PXD000404 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD000404
- Label: PRIDE project
- Name: Comparative Proteome Profiling of Bovine and Human Staphylococcus epidermidis Strains to Search for Cell-surface Bound Factors with Plausible Roles in Virulence or Adaptation