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PXD000395

PXD000395 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleChromosome 11-Centric Human Proteome Project
DescriptionFor the analysis of chromosome 11-centric human proteome, we analyzed the human brain hippocampal proteome. The samples from brain tissues were extensively off-gel fractionated by 12 fractions and analyzed by a high resolution mass spectrometer, Orbitrap XL ETD with collision induced dissociation, after LC separation using C18 column.
HostingRepositoryPRIDE
AnnounceDate2016-10-10
AnnouncementXMLSubmission_2016-10-10_09:37:05.xml
DigitalObjectIdentifierhttp://dx.doi.org/10.6019/PXD000395
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportSupported dataset by repository
PrimarySubmitterKyung-Hoon Kwon
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListNo PTMs are included in the dataset
Instrumentinstrument model: LTQ-Orbitrap XL ETD
Dataset History
RevisionDatetimeStatusChangeLog Entry
02013-08-02 03:10:32ID requested
12016-10-10 09:37:07announced
Publication List
Hwang H, Park GW, Kim KH, Lee JY, Lee HK, Ji ES, Park SK, Xu T, Yates JR, Kwon KH, Park YM, Lee HJ, Paik YK, Kim JY, Yoo JS, Chromosome-Based Proteomic Study for Identifying Novel Protein Variants from Human Hippocampal Tissue Using Customized neXtProt and GENCODE Databases. J Proteome Res, 14(12):5028-37(2015) [pubmed]
Keyword List
ProteomeXchange project tag: Human Proteome Project
submitter keyword: chromosome 11, Human Brain Hippocampus tissues, PE fraction, OFFGEL Fractionation
Contact List
Jinyoung Kim
contact affiliationKorea Basic Science Institute
contact emailjinyoung@kbsi.re.kr
lab head
Kyung-Hoon Kwon
contact affiliationDivision of Mass Spectrometry Research
contact emailkhoon62@hanmail.net
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
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