PXD000096-2
PXD000096 is an original dataset announced via ProteomeXchange.
Dataset Summary
Title | RIPchipSRM C. elegans miR58 targets (Jovanovic, et al.) |
Description | To discover new miRNA targets, we generated a C. elegans transgenic line expressing a functional, N-terminally tandem affinity purification (TAP)-tagged ALG-1 protein (TAP::ALG-1 strain) (see Methods for details).We next purified TAP::ALG-1 complexes from mixed-stage TAP::ALG-1 transgenic and wild-type animals (serving as a mock control) and hybridized the associated mRNAs to twocolor microarrays. |
HostingRepository | PeptideAtlas |
AnnounceDate | 2014-03-11 |
AnnouncementXML | Submission_2014-03-12_13:28:14.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Lukas Reiter |
SpeciesList | scientific name: Caenorhabditis elegans; NCBI TaxID: 6239; |
ModificationList | isotope labeled residue |
Instrument | 4000 QTRAP |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
---|---|---|---|
0 | 2012-12-11 16:27:52 | ID requested | |
1 | 2012-12-11 16:28:23 | announced | |
⏵ 2 | 2014-03-12 13:28:15 | announced | update LabHead |
Publication List
Jovanovic M, Reiter L, Clark A, Weiss M, Picotti P, Rehrauer H, Frei A, Neukomm LJ, Kaufman E, Wollscheid B, Simard MJ, Miska EA, Aebersold R, Gerber AP, Hengartner MO, RIP-chip-SRM--a new combinatorial large-scale approach identifies a set of translationally regulated bantam/miR-58 targets in C. elegans. Genome Res, 22(7):1360-71(2012) [pubmed] |
Keyword List
curator keyword: selected reaction monitoring, SRM, targeted |
Contact List
Lukas Reiter | |
---|---|
contact affiliation | UZH |
contact email | boardsofcanada@gmx.ch |
dataset submitter | |
Michael O. Hengartner | |
contact affiliation | UZH |
contact email | michael.hengartner@imls.uzh.ch |
lab head |
Full Dataset Link List
PeptideAtlas dataset URI |
PASSEL experiment URI |
PASSEL transition group browser URI |