PXD000066-2
PXD000066 is an original dataset announced via ProteomeXchange.
Dataset Summary
Title | In-depth membrane proteomic study of breast cancer tissues |
Description | Proteomics on Human breast cancer tissue samples. 9 patients with high risk or 9 patiens low risk MammaPrint breast cancer. Membran fraction. Proteins were reduced, alkylated, digested with Lys-C and Trypsin, and labelled with iTRAQ4plex: 114; high risk; 115; low risk. |
HostingRepository | PRIDE |
AnnounceDate | 2013-01-09Z |
AnnouncementXML | Submission_2013-01-09_05:43:36.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
Reprocessed datasets that are derived from this dataset | RPXD000665 |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | satoshi muraoka |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | iodoacetamide derivatized residue; iTRAQ4plex-116 reporter+balance reagent acylated residue; monohydroxylated residue |
Instrument | LTQ Orbitrap Velos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
---|---|---|---|
0 | 2012-11-06 05:54:35 | ID requested | |
1 | 2013-01-08 02:39:40 | announced | |
1 | 2014-07-24 03:46:52 | announced | |
⏵ 2 | 2013-01-09 05:43:36 | announced | Add reference |
Publication List
Muraoka S, Kume H, Adachi J, Shiromizu T, Watanabe S, Masuda T, Ishihama Y, Tomonaga T, In-depth membrane proteomic study of breast cancer tissues for the generation of a chromosome-based protein list. J Proteome Res, 12(1):208-13(2013) [pubmed] |
Keyword List
submitter keyword: human, breast cancer, membrane protein |
Contact List
satoshi muraoka | |
---|---|
contact affiliation | Proteome Research Center |
contact email | s-muraoka@nibio.go.jp |
Full Dataset Link List
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/2013/01/PXD000066 |