PXD000066

PXD000066 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	In-depth membrane proteomic study of breast cancer tissues
Description	Proteomics on Human breast cancer tissue samples. 9 patients with high risk or 9 patiens low risk MammaPrint breast cancer. Membran fraction. Proteins were reduced, alkylated, digested with Lys-C and Trypsin, and labelled with iTRAQ4plex: 114; high risk; 115; low risk.
HostingRepository	PRIDE
AnnounceDate	2013-01-09Z
AnnouncementXML	Submission_2013-01-09_05:43:36.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
Reprocessed datasets that are derived from this dataset	RPXD000665
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	satoshi muraoka
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	iodoacetamide derivatized residue; iTRAQ4plex-116 reporter+balance reagent acylated residue; monohydroxylated residue
Instrument	LTQ Orbitrap Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2012-11-06 05:54:35	ID requested
1	2013-01-08 02:39:40	announced
1	2014-07-24 03:46:52	announced
⏵ 2	2013-01-09 05:43:36	announced	Add reference

Publication List

Muraoka S, Kume H, Adachi J, Shiromizu T, Watanabe S, Masuda T, Ishihama Y, Tomonaga T, In-depth membrane proteomic study of breast cancer tissues for the generation of a chromosome-based protein list. J Proteome Res, 12(1):208-13(2013) [pubmed]

Muraoka S, Kume H, Adachi J, Shiromizu T, Watanabe S, Masuda T, Ishihama Y, Tomonaga T, In-depth membrane proteomic study of breast cancer tissues for the generation of a chromosome-based protein list. J Proteome Res, 12(1):208-13(2013) [pubmed]

Keyword List

submitter keyword: human, breast cancer, membrane protein

submitter keyword: human, breast cancer, membrane protein

Contact List

satoshi muraoka
contact affiliation	Proteome Research Center
contact email	s-muraoka@nibio.go.jp

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/2013/01/PXD000066

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/2013/01/PXD000066