PXD053402
PXD053402 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Kiriakopulos_CISTR_BioID_P124_6600 |
| Description | This dataset consists of 12 raw MS files and associated peak lists and results files, acquired on a ABSciex TripleTOF6600 mass spectrometer operated in Data Dependent Acquisition mode. Samples were generated by Katerina Kiriakopulos. Affinity purifications were performed by Katerina Kiriakopulos and Cassandra Wong. Mass spectrometry acquisition was performed by Cassandra Wong. Analysis was performed by Katerina Kiriakopulos, Philipp Maass, and Cassandra Wong. The files are associated with a manuscript submitted for publication by Katerina Kiriakopulos et al. The main goal of this paper was to profile the proximity interactome CISTR-ACT, a lncRNA. This dataset identifies the important proteins that interact with CISTR-ACT to facilitate trans-regulation of cell size genes. Philipp G. Maass is the corresponding author of the manuscript (Philipp.maass@sickkids.ca); Anne-Claude Gingras should be contacted for questions on this dataset (gingras@lunenfeld.ca) This submission is associated with 4 Supplementary Files (in addition to this README file) Table 1 describes the composition of this dataset Table 2 lists all the peptide identification evidence (as per iProphet) Table 3 lists the SAINTexpress interactions for SAINTID 6346 Table 4 lists the SAINTexpress interactions for SAINTID 6390 |
| HostingRepository | MassIVE |
| AnnounceDate | 2025-11-17 |
| AnnouncementXML | Submission_2025-11-17_10:45:18.885.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Non peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Supported dataset by repository |
| PrimarySubmitter | Gingras Lab |
| SpeciesList | scientific name: Homo sapiens; common name: human; NCBI TaxID: 9606; |
| ModificationList | deamidated L-asparagine; deamidated L-glutamine; L-methionine sulfoxide |
| Instrument | TripleTOF 6600 |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2024-06-25 10:59:53 | ID requested | |
| ⏵ 1 | 2025-11-17 10:45:19 | announced |
Publication List
| no publication |
Keyword List
| submitter keyword: BioID, proximity-dependent biotinylation, CISTR-ACT, cell size |
Contact List
| Anne-Claude Gingras | |
|---|---|
| contact affiliation | LTRI |
| contact email | gingras@lunenfeld.ca |
| lab head | |
| Gingras Lab | |
| contact affiliation | Samuel Lunenfeld Research Institute |
| contact email | gingras@mshri.on.ca |
| dataset submitter | |
Full Dataset Link List
| MassIVE dataset URI |
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive-ftp.ucsd.edu/v08/MSV000095145/ |
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