<?xml version='1.0' encoding='UTF-8'?> <ProteomeXchangeDataset id="PXD049020" formatVersion="1.4.0" xsi:noNamespaceSchemaLocation="proteomeXchange-1.4.0.xsd" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"> <CvList> <Cv id="MS" fullName="PSI-MS" uri="https://raw.githubusercontent.com/HUPO-PSI/psi-ms-Cv/master/psi-ms.obo"/> <Cv id="MOD" fullName="PSI-MOD" uri="https://raw.githubusercontent.com/HUPO-PSI/psi-mod-CV/master/PSI-MOD.obo"/> <Cv id="UNIMOD" fullName="UNIMOD" uri="http://www.unimod.org/obo/unimod.obo"/> </CvList> <DatasetSummary announceDate="2024-05-16" hostingRepository="PanoramaPublic" title="IO3 immunoMRM panel experimental data"> <Description>We previously developed robust, multiplexed quantitative assays for immunomodulatory proteins using targeted mass spectrometry, providing measurements that can be performed reproducibly and harmonized across laboratories. Here, we expand upon those efforts in presenting data from a multiplexed immuno-oncology (IO)-3 assay panel targeting 43 peptides representing 39 immune- and inflammation-related proteins.</Description> <ReviewLevel> <cvParam cvRef="MS" accession="MS:1002855" name="Non peer-reviewed dataset"/> </ReviewLevel> <RepositorySupport> <cvParam cvRef="MS" accession="MS:1002856" name="Supported dataset by repository"/> </RepositorySupport> </DatasetSummary> <DatasetIdentifierList> <DatasetIdentifier> <cvParam cvRef="MS" accession="MS:1001919" name="ProteomeXchange accession number" value="PXD049020"/> <cvParam cvRef="MS" accession="MS:1001921" name="ProteomeXchange accession number version number" value="1"/> </DatasetIdentifier> <DatasetIdentifier> <cvParam cvRef="MS" accession="MS:1002872" name="Panorama Public dataset identifier" value="https://panoramaweb.org/IO3immunoMRMpanel.url"/> </DatasetIdentifier> </DatasetIdentifierList> <DatasetOriginList> <DatasetOrigin> <cvParam cvRef="MS" accession="MS:1002868" name="Original data"/> </DatasetOrigin> </DatasetOriginList> <SpeciesList> <Species> <cvParam cvRef="MS" accession="MS:1001469" name="taxonomy: scientific name" value="Homo sapiens"/> <cvParam cvRef="MS" accession="MS:1001467" name="taxonomy: NCBI TaxID" value="9606"/> </Species> </SpeciesList> <InstrumentList> <Instrument id="instrument_1"> <cvParam cvRef="MS" accession="MS:1000931" name="QTRAP 5500"/> </Instrument> </InstrumentList> <ModificationList> <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/> <cvParam cvRef="UNIMOD" accession="UNIMOD:21" name="Phospho"/> <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/> <cvParam cvRef="UNIMOD" accession="UNIMOD:121" name="GG"/> <cvParam cvRef="UNIMOD" accession="UNIMOD:188" name="Label:13C(6)"/> <cvParam cvRef="UNIMOD" accession="UNIMOD:259" name="Label:13C(6)15N(2)"/> <cvParam cvRef="UNIMOD" accession="UNIMOD:267" name="Label:13C(6)15N(4)"/> </ModificationList> <ContactList> <Contact id="lab_head"> <cvParam cvRef="MS" accession="MS:1002332" name="lab head"/> <cvParam cvRef="MS" accession="MS:1000586" name="contact name" value="Jeff Whiteaker"/> <cvParam cvRef="MS" accession="MS:1000589" name="contact email" value="jwhiteak@fhcrc.org"/> <cvParam cvRef="MS" accession="MS:1000590" name="contact affiliation" value="Fred Hutchinson Cancer Center"/> </Contact> <Contact id="dataset_submitter"> <cvParam cvRef="MS" accession="MS:1002037" name="dataset submitter"/> <cvParam cvRef="MS" accession="MS:1000586" name="contact name" value="Jeff Whiteaker"/> <cvParam cvRef="MS" accession="MS:1000589" name="contact email" value="jwhiteak@fhcrc.org"/> <cvParam cvRef="MS" accession="MS:1000590" name="contact affiliation" value="Fred Hutchinson Cancer Center"/> </Contact> </ContactList> <PublicationList> <Publication id="pending"> <cvParam cvRef="MS" accession="MS:1002858" name="Dataset with its publication pending"/> </Publication> </PublicationList> <KeywordList> <cvParam cvRef="MS" accession="MS:1001925" name="submitter keyword" value="immunotherapy"/> <cvParam cvRef="MS" accession="MS:1001925" name="submitter keyword" value="immunomodulation"/> <cvParam cvRef="MS" accession="MS:1001925" name="submitter keyword" value="mutliplexing"/> </KeywordList> <FullDatasetLinkList> <FullDatasetLink> <cvParam cvRef="MS" accession="MS:1002873" name="Panorama Public dataset URI" value="https://panoramaweb.org/IO3immunoMRMpanel.url"/> </FullDatasetLink> </FullDatasetLinkList> </ProteomeXchangeDataset>