PXD043262
PXD043262 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Quartet Protein Reference Materials for Multi-platform Assessment of Label-free Proteomics |
| Description | We developed the Quartet as a bulk of proteome reference materials with built-in truth, and distributed the same aliquots to 15 laboratories in six cities of China with nine conventional LC-MS/MS platforms. Relative protein abundances from over 12,000 proteins on 816 MS files were obtained and compared for reproducibility among the different instruments and laboratories to ultimately generate proteomics benchmark datasets. |
| HostingRepository | iProX |
| AnnounceDate | 2023-06-24 |
| AnnouncementXML | Submission_2023-09-12_19:34:20.416.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Sha Tian |
| SpeciesList | scientific name: Homo sapiens; NCBI TaxID: 9606; |
| ModificationList | No PTMs are included in the dataset |
| Instrument | Orbitrap Exploris 480; Orbitrap Fusion; Orbitrap Fusion Lumos; Q Exactive; Q Exactive HF; Q Exactive HF-X; Q Exactive Plus; timsTOF Pro; TripleTOF 6600 |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2023-06-24 20:31:34 | ID requested | |
| 1 | 2023-06-24 20:33:00 | announced | |
| ⏵ 2 | 2023-09-12 19:34:21 | announced | 2023-09-13: Update publication information. |
Publication List
| Tian S, Zhan D, Yu Y, Wang Y, Liu M, Tan S, Li Y, Song L, Qin Z, Li X, Liu Y, Li Y, Ji S, Wang S, Zheng Y, He F, Qin J, Ding C, Qin Z, He Q, Yin X, Dai L, Deng H, Peng C, Wu P, Tan M, Jiang J, Zhang Y, Li Y, Liu W, Chen W, Wang R, Zi J, Li Q, Bai M, Wang Z, Mei Z, Cheng Z, Zhu J, Wu X, Yang X, Zhou Y, Quartet protein reference materials and datasets for multi-platform assessment of label-free proteomics. Genome Biol, 24(1):202(2023) [pubmed] |
Keyword List
| submitter keyword: Quantitative proteomics, Reference materials, Benchmark datasets |
Contact List
| Chen Ding | |
|---|---|
| contact affiliation | Fudan University |
| contact email | chend@fudan.edu.cn |
| lab head | |
| Sha Tian | |
| contact affiliation | Fudan University |
| contact email | shat@fudan.edu.cn |
| dataset submitter | |
Full Dataset Link List
| iProX dataset URI |
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