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PXD042321 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleComparing extraction method efficiency for high-throughput palaeoproteomic bone species identification.
Description12 Pleistocene bone samples were analyzed using LC-MS/MS in order to characterize their proteome for species identification and potential protein damage characteristics, comparing several different protein extraction methods.
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterDorothea Mylopotamitaki
SpeciesList scientific name: Hyaenidae; NCBI TaxID: 9676; scientific name: Ursidae; NCBI TaxID: 9632; scientific name: Rhinocerotidae; NCBI TaxID: 9803; scientific name: Ovis aries; NCBI TaxID: 9940; scientific name: Equidae; NCBI TaxID: 9788; scientific name: Felinae; NCBI TaxID: 338152; scientific name: Bovidae; NCBI TaxID: 9895; scientific name: Capra sp.; NCBI TaxID: 61294;
ModificationListhydroxylated proline; 2-pyrrolidone-5-carboxylic acid (Glu); 2-pyrrolidone-5-carboxylic acid (Gln); N-ethylmaleimide derivatized cysteine; monohydroxylated residue; deamidated residue
InstrumentOrbitrap Exploris 480
Dataset History
RevisionDatetimeStatusChangeLog Entry
02023-05-18 05:34:56ID requested
12024-01-15 02:02:34announced
Publication List
Keyword List
submitter keyword: protein damage, collagen, HTS bone palaeoproteomics,Species identification, DDA, Non-collagenous proteins
Contact List
Frido Welker
contact affiliationSection for Molecular Ecology and Evolution, Biomolecular Palaeoanthropology Lab, Globe Institute, University of Copenhagen
contact emailfrido.welker@sund.ku.dk
lab head
Dorothea Mylopotamitaki
contact affiliationChaire de Paléoanthropologie, CIRB (UMR 7241–U1050), Collège de France
contact emaildorothea.mylopotamitaki@palaeoproteomics.org
dataset submitter
Full Dataset Link List
Dataset FTP location
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