PXD037438 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | A hybrid structural determination approach to investigate protein-RNA complexes of the nucleocapsid protein of SARS-CoV-2 |
Description | UV-light-induced protein-RNA cross-linking followed by MS analysis was used to identify the interaction sites between the N-terminal (NTD) or C-terminal domain (CTD) of the SARS-CoV-2 nucleocapsid protein and the s2m element of the viral RNA. |
HostingRepository | PRIDE |
AnnounceDate | 2023-03-13 |
AnnouncementXML | Submission_2023-03-13_04:22:58.589.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | AlexanderLeitner |
SpeciesList | scientific name: Severe acute respiratory syndrome coronavirus 2; NCBI TaxID: 2697049; |
ModificationList | iodoacetamide derivatized residue |
Instrument | Orbitrap Fusion Lumos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2022-10-14 07:15:26 | ID requested | |
⏵ 1 | 2023-03-13 04:22:58 | announced | |
Publication List
Dataset with its publication pending |
Keyword List
ProteomeXchange project tag: Sars-cov-2, Covid-19 |
submitter keyword: nucleocapsid, protein-RNA cross-linking, UV cross-linking,Protein-RNA complexes, SARS-CoV-2 |
Contact List
AlexanderLeitner |
contact affiliation | ETH Zurich, Institute of Molecular Systems Biology, Zurich, Switzerland |
contact email | leitner@imsb.biol.ethz.ch |
lab head | |
AlexanderLeitner |
contact affiliation | ETH Zurich, Institute of Molecular Systems Biology |
contact email | leitner@imsb.biol.ethz.ch |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD037438
- Label: PRIDE project
- Name: A hybrid structural determination approach to investigate protein-RNA complexes of the nucleocapsid protein of SARS-CoV-2