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PXD030003 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleWhole-cell modeling in yeast predicts compartment-specific proteome constraints that drive metabolic strategies
DescriptionOur comprehensive model identifies condition-dependent and compartment-specific constraints that can explain metabolic strategies and protein expression profiles from growth rate optimization, providin a framework to understand metabolic adaptation in eukaryal cells.
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterManuel Garcia-Albornoz
SpeciesList scientific name: Saccharomyces cerevisiae (Baker's yeast); NCBI TaxID: 4932;
ModificationListacetylated residue; monohydroxylated residue
InstrumentLTQ Orbitrap Velos
Dataset History
RevisionDatetimeStatusChangeLog Entry
02021-11-28 05:35:45ID requested
12022-01-24 03:34:24announced
22022-03-03 06:58:57announced2022-03-03: Updated publication reference for PubMed record(s): 35145105.
Publication List
Elsemman IE, Rodriguez Prado A, Grigaitis P, Garcia Albornoz M, Harman V, Holman SW, van Heerden J, Bruggeman FJ, Bisschops MMM, Sonnenschein N, Hubbard S, Beynon R, Daran-Lapujade P, Nielsen J, Teusink B, Whole-cell modeling in yeast predicts compartment-specific proteome constraints that drive metabolic strategies. Nat Commun, 13(1):801(2022) [pubmed]
Keyword List
submitter keyword: MS/MS, metabolic networks, genetic regulation
Contact List
Simon Hubbard
contact affiliationUniversity of Manchester. Professor
contact emailsimon.hubbard@manchester.ac.uk
lab head
Manuel Garcia-Albornoz
contact affiliationThe Francis Crick Institute
contact emailmanuel.garciaalbornoz@crick.ac.uk
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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