PXD025859

PXD025859 is an original dataset announced via ProteomeXchange.

Title	Structural Interpretation of Glycosite-specific N-Glycans Using Tandem Mass Spectrometry
Description	In this project we developed a new algorithm termed StrucGP, for large-scale interpretation of N-glycan structures on intact glycopeptides from tandem mass spectrometry data. StrucGP is able to reveal the glycan structure heterogeneity for individual glycosites. The StrucGP also has high performance in distinguishing various structure isoforms and identifying new and rare glycan structures from complex samples.
HostingRepository	PRIDE
AnnounceDate	2021-07-07
AnnouncementXML	Submission_2021-07-07_00:31:44.846.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Shen Jiechen
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090; scientific name: Bos taurus (Bovine); NCBI TaxID: 9913; scientific name: Gallus gallus (Chicken); NCBI TaxID: 9031; scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Fusion Lumos

Revision	Datetime	Status	ChangeLog Entry
0	2021-05-07 04:20:41	ID requested
⏵ 1	2021-07-07 00:31:45	announced

Dataset with its publication pending

submitter keyword: N-Glycans, Glycan structure, Intact glycopeptides

Sun Shisheng
contact affiliation	College of Life Science, Northwest University, Xi’an, China
contact email	suns@nwu.edu.cn
lab head
Shen Jiechen
contact affiliation	College of Life Science, Northwest University, Xi’an, 710069, P. R. China
contact email	JiechenShenGlyco@163.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/07/PXD025859

PRIDE project URI

• PRIDE
  1. PXD025859
     1. Label: PRIDE project
     2. Name: Structural Interpretation of Glycosite-specific N-Glycans Using Tandem Mass Spectrometry