PXD025214 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | SARS-CoV-2 detection from clinical samples |
Description | Shotgun analysis of SARS-CoV-2 clinical samples previously characterized by RT-PCR. |
HostingRepository | PRIDE |
AnnounceDate | 2021-04-07 |
AnnouncementXML | Submission_2021-04-06_22:43:28.808.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | VALDEMIR CARVALHO |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; scientific name: Severe acute respiratory syndrome coronavirus 2; NCBI TaxID: 2697049; |
ModificationList | No PTMs are included in the dataset |
Instrument | Q Exactive HF-X |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2021-04-06 07:10:11 | ID requested | |
⏵ 1 | 2021-04-06 22:43:29 | announced | |
Publication List
Cardozo KHM, Lebkuchen A, Okai GG, Schuch RA, Viana LG, Olive AN, Lazari CDS, Fraga AM, Granato CFH, Pint, ã, o MCT, Carvalho VM, Establishing a mass spectrometry-based system for rapid detection of SARS-CoV-2 in large clinical sample cohorts. Nat Commun, 11(1):6201(2020) [pubmed] |
Keyword List
ProteomeXchange project tag: Sars-cov-2, Covid-19 |
submitter keyword: SARS-CoV-2, shotgun proteomics |
Contact List
Valdemir Melechco Carvalho |
contact affiliation | Fleury Group |
contact email | melechco@gmail.com |
lab head | |
VALDEMIR CARVALHO |
contact affiliation | Fleury Group |
contact email | melechco@gmail.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/04/PXD025214 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD025214
- Label: PRIDE project
- Name: SARS-CoV-2 detection from clinical samples