PXD025139

PXD025139 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Pathway-guided monitoring of the disease course in bladder cancer with longitudinal urine proteomics
Description	In this work, we introduce a new concept we have developed and tested, named the differential Personal Pathway index (dPPi). This tool extracts and summates comprehensive disease-specific information contained within an individual’s proteome as a holistic way to follow the response to disease and medical care over time. We demonstrate the principle of the dPPi algorithm on proteins found in urine from patients suffering from neoplasia of the bladder.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_08:55:52.295.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Hugo M. Santos
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	iodoacetamide derivatized residue
Instrument	impact HD

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-04-01 02:26:32	ID requested
1	2023-01-16 12:16:41	announced
⏵ 2	2023-11-14 08:55:52	announced	2023-11-14: Updated project metadata.

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

submitter keyword: Urine, LC-MSMS, Bladder cancer, Precision medicine, label-free quantification

submitter keyword: Urine, LC-MSMS, Bladder cancer, Precision medicine, label-free quantification

Contact List

Hugo M. Santos
contact affiliation	NOVA School of Science and Technology, NOVA University of Lisbon
contact email	hmsantos@fct.unl.pt
lab head
Hugo M. Santos
contact affiliation	LAQV-REQUIMTE, Department of Chemistry, School of Science and Technology, NOVA University of Lisbon
contact email	hmsantos@fct.unl.pt
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/01/PXD025139
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/01/PXD025139

PRIDE project URI

Repository Record List

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