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PXD019487 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleCTCF loss has limited effects on genome architecture in Drosophila despite critical regulatory functions.
DescriptionProteins co-purifying with recombinantly purified and N-terminally GFP-3C-tagged CTCF N-terminus (amino acids 1-293) produced in bacteria were identified by incubating the tagged bait with soluble nuclear protein extracts from 0-12h hour-old wildtype (OregonR strain) Drosophila melanogaster embryos.
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterManfredo Quadroni
SpeciesList scientific name: Drosophila melanogaster (Fruit fly); NCBI TaxID: 7227;
ModificationListmonohydroxylated residue; acetylated residue
InstrumentLTQ Orbitrap Velos
Dataset History
RevisionDatetimeStatusChangeLog Entry
02020-06-01 03:10:44ID requested
12021-03-04 12:39:55announced
22021-08-06 02:21:14announced2021-08-06: Updated publication reference for PubMed record(s): 33579945.
Publication List
Kaushal A, Mohana G, Dorier J, Ö, zdemir I, Omer A, Cousin P, Semenova A, Taschner M, Dergai O, Marzetta F, Iseli C, Eliaz Y, Weisz D, Shamim MS, Guex N, Lieberman Aiden E, Gambetta MC, CTCF loss has limited effects on global genome architecture in Drosophila despite critical regulatory functions. Nat Commun, 12(1):1011(2021) [pubmed]
Keyword List
submitter keyword: genome organization, silencers
Contact List
Maria Cristina Gambetta
contact affiliationCenter for Integrative Genomics University of Lausanne Genopode building, quartier Sorge 1015 Lausanne, Switzerland
contact emailmariacristina.gambetta@unil.ch
lab head
Manfredo Quadroni
contact affiliationUniversity of Lausanne
contact emailmanfredo.quadroni@unil.ch
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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