PXD005288

PXD005288 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Chickspress: a resource for chicken gene expression
Description	Red Jungle Fowl (male and female) tissues were analyzed using LC-MS/MS. Tissues analyzed were: adipose, adrenal gland, breast muscle, cerebellum, cerebrum, gonad, heart, hypothalamus, kidney, liver, lung, pancreas, proventriculus, sciatic nerve, speen. Samples were analyzed using an LTQ Velos Pro mass spectrometer. Xtandem was used to perform spectrum searches. Databases included are NCB refseq, Ensembl, and 6-frame translation of the chicken genome.
HostingRepository	MassIVE
AnnounceDate	2022-07-05
AnnouncementXML	Submission_2022-07-05_10:09:26.171.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Ken Pendarvis
SpeciesList	scientific name: Gallus gallus; common name: chicken; NCBI TaxID: 9031;
ModificationList	Oxidation; Dioxidation; Carbamidomethyl; Sulfo
Instrument	LTQ Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2016-11-07 18:38:57	ID requested
⏵ 1	2022-07-05 10:09:27	announced

Publication List

McCarthy FM, Pendarvis K, Cooksey AM, Gresham CR, Bomhoff M, Davey S, Lyons E, Sonstegard TS, Bridges SM, Burgess SC, Chickspress: a resource for chicken gene expression. Database (Oxford), 2019():(2019) [pubmed]

McCarthy FM, Pendarvis K, Cooksey AM, Gresham CR, Bomhoff M, Davey S, Lyons E, Sonstegard TS, Bridges SM, Burgess SC, Chickspress: a resource for chicken gene expression. Database (Oxford), 2019():(2019) [pubmed]

Keyword List

submitter keyword: gallus, chicken, adipose, adrenal gland, breast muscle, cerebellum, cerebrum, heart, hypothalamus, kidney, gonad, liver, lung, proventriculus, pancreas, sciatic nerve, spleen

submitter keyword: gallus, chicken, adipose, adrenal gland, breast muscle, cerebellum, cerebrum, heart, hypothalamus, kidney, gonad, liver, lung, proventriculus, pancreas, sciatic nerve, spleen

Contact List

Fiona McCarthy
lab head
Ken Pendarvis
contact affiliation	University of Arizona
contact email	jkpendarvis@email.arizona.edu
dataset submitter

Full Dataset Link List

MassIVE dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000080320/

MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000080320/