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PXD003841 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleTube-gel digestion: a fast and reproducible sample preparation protocol for label-free quantitative proteomics of complex biological samples
DescriptionComparison of tube-gel protocol to stacking gel and liquid digestion for label-free extracted ion-current quantification of complex biological samples Dataset with known fold-changes (UPS1 spiked in yeast background at 25-10-5-2.5-1-0.5 fmol)
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterLeslie MULLER
SpeciesList scientific name: Saccharomyces cerevisiae (Baker's yeast); NCBI TaxID: 4932;
ModificationListS-carboxamidoethyl-L-cysteine; monohydroxylated residue; iodoacetamide derivatized residue
InstrumentQ Exactive
Dataset History
RevisionDatetimeStatusChangeLog Entry
02016-03-22 06:23:54ID requested
12016-10-18 02:42:43announced
Publication List
Muller L, Fornecker L, Van Dorsselaer A, Cianf, é, rani S, Carapito C, Benchmarking sample preparation/digestion protocols reveals tube-gel being a fast and repeatable method for quantitative proteomics. Proteomics, 16(23):2953-2961(2016) [pubmed]
Keyword List
submitter keyword: Label-free quantitative proteomics, sample preparation, tube-gel, stacking gel, liquid digestion
Contact List
contact affiliationUMR 7178 - IPHC - CNRS - UdS - Laboratory of BioOrganic Mass Spectrometry - STRASBOURG, FRANCE
contact emailsarah.cianferani@unistra.fr
lab head
contact affiliationUMR7178 IPHC-DSA-LSMBO
contact emailleslie.muller@etu.unistra.fr
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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