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<ProteomeXchangeDataset formatVersion="1.0.0" id="PXD000001" xsi:noNamespaceSchemaLocation="proteomeXchange-draft-07.xsd" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
    <ChangeLog>
        <ChangeLogEntry date="2013-06-04">Add reference</ChangeLogEntry>
    </ChangeLog>
    <DatasetSummary title="TMT spikes" hostingRepository="PRIDE" announceDate="2013-06-04">
        <Description>Expected reporter ion ratios: Erwinia peptides:    1:1:1:1:1:1 Enolase spike (sp|P00924|ENO1_YEAST):  10:5:2.5:1:2.5:10 BSA spike (sp|P02769|ALBU_BOVIN):  1:2.5:5:10:5:1 PhosB spike (sp|P00489|PYGM_RABIT):  2:2:2:2:1:1 Cytochrome C spike (sp|P62894|CYC_BOVIN): 1:1:1:1:1:2</Description>
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            <cvParam accession="PRIDE:0000414" cvRef="PRIDE" name="Peer-reviewed dataset"/>
        </ReviewLevel>
        <RepositorySupport>
            <cvParam accession="PRIDE:0000416" cvRef="PRIDE" name="Supported dataset by repository"/>
        </RepositorySupport>
    </DatasetSummary>
    <DatasetIdentifierList>
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        </DatasetIdentifier>
        <DatasetIdentifier>
            <cvParam accession="MS:1001922" cvRef="MS" value="10.6019/PXD000001" name="Digital Object Identifier (DOI)"/>
        </DatasetIdentifier>
    </DatasetIdentifierList>
    <DatasetOriginList>
        <DatasetOrigin>
            <cvParam accession="PRIDE:0000402" cvRef="PRIDE" name="Original data"/>
        </DatasetOrigin>
    </DatasetOriginList>
    <SpeciesList>
        <Species>
            <cvParam accession="MS:1001469" cvRef="PSI-MS" value="Erwinia carotovora" name="taxonomy: scientific name"/>
            <cvParam accession="MS:1001467" cvRef="PSI-MS" value="554" name="taxonomy: NCBI TaxID"/>
        </Species>
    </SpeciesList>
    <InstrumentList>
        <Instrument id="INSTRUMENT_1">
            <cvParam accession="MS:1000484" cvRef="MS" name="orbitrap"/>
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    </InstrumentList>
    <ModificationList>
        <cvParam accession="MOD:01720" cvRef="MOD" name="TMT6plex-126 reporter+balance reagent acylated residue"/>
        <cvParam accession="MOD:00425" cvRef="MOD" name="monohydroxylated residue"/>
        <cvParam accession="MOD:01153" cvRef="MOD" name="methylthiolated residue"/>
    </ModificationList>
    <ContactList>
        <Contact id="Laurent_Gatto">
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            <cvParam accession="MS:1000589" cvRef="MS" value="lg390@cam.ac.uk" name="contact email"/>
            <cvParam accession="MS:1000590" cvRef="MS" value="University of Cambridge" name="contact affiliation"/>
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        <Contact id="Andy_Christoforou">
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        <Contact id="Kathryn_S._Lilley">
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    <PublicationList>
        <Publication id="PMID23692960">
            <cvParam accession="MS:1000879" cvRef="MS" value="23692960" name="PubMed identifier"/>
            <cvParam accession="PRIDE:0000400" cvRef="PRIDE" value="Gatto L, Christoforou A. Using R and Bioconductor for proteomics data analysis. Biochim Biophys Acta. 2013 May 18. doi:pii: S1570-9639(13)00186-6. 10.1016/j.bbapap.2013.04.032" name="Reference"/>
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        <cvParam accession="MS:1001925" cvRef="MS" value="TMT,Eriwinia,spikes" name="submitter keyword"/>
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    <RepositoryRecordList>
        <RepositoryRecord uri="http://www.ebi.ac.uk/pride/simpleSearch.do?simpleSearchValue=22134" repositoryID="PRIDE" recordID="22134" label="TMTspikes" name="TMT_Erwinia_1uLSike_Top10HCD_isol2_45stepped_60min_01">
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                <Sample name="Erwinia">
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                    <cvParam accession="554" cvRef="NEWT" name="Erwinia carotovora"/>
                    <cvParam accession="PRIDE:0000290" cvRef="PRIDE" name="TMT reagent 131"/>
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                <cvParam accession="MOD:01720" cvRef="MOD" name="TMT6plex-126 reporter+balance reagent acylated residue"/>
                <cvParam accession="MOD:00425" cvRef="MOD" name="monohydroxylated residue"/>
                <cvParam accession="MOD:01153" cvRef="MOD" name="methylthiolated residue"/>
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</ProteomeXchangeDataset>