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RPXD034664

RPXD034664 is container for one or more analyses. The general container metadata is provided below and the table under Dataset History provides links to the various reanalyses have been provided (if any) in this container.

Reanalysis Container Summary

Title	JPST000115-1 Identification of ubiquitylation sites by K0-Ub [Reanalysis: JPST000115]
Description	We have now developed a method for the efficient identification of ubiquitylation sites in target proteins with the use of an engineered form of ubiquitin (K0-Ub), in which all seven lysine residues are replaced with arginine. K0-Ub is covalently attached to lysine residues of target proteins via an isopeptide bond, but further formation of a polyubiquitin chain does not occur on K0-Ub. We identified a total of 1392 ubiquitylation sites of 794 proteins from HEK293T cells. [Original project description]
HostingRepository	jPOST
AnnounceDate	2023-03-25
AnnouncementXML	Submission_2023-03-25_06:08:46.595.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/RPXD034664
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Reanalysis of JPST000115
RepositorySupport	Supported dataset by repository
PrimarySubmitter	jPOST reanalysis
SpeciesList	scientific name: HEK293T; NCBI TaxID: BTO:0002181;
ModificationList	S-carboxamidomethyl-L-cysteine; 2-pyrrolidone-5-carboxylic acid (Gln); L-methionine sulfoxide; unknown modification
Instrument	LTQ Orbitrap

Dataset History

Reanalysis	Revision	Datetime	Status	Title / ChangeLog Entry
	0	2022-06-19 17:27:18	ID requested
0	1	2023-03-25 06:08:47	announced	JPST000115-1 Identification of ubiquitylation sites by K0-Ub [Reanalysis: JPST000115]

Publication List

no publication

no publication

Keyword List

submitter keyword: reanalysis, Lysine-less ubiquitin

submitter keyword: reanalysis, Lysine-less ubiquitin

Contact List

Yasushi Ishihama
lab head
jPOST reanalysis
contact affiliation	jPOST
dataset submitter

Full Dataset Link List

jPOST dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST001682/

jPOST dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST001682/