⮝ Full datasets listing
PXD061505
PXD061505 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Theropod: Tools to Analyze Externally Collected Selective Temporal Overview of Resonant Ions |
| Description | Recent developments in charge detection mass spectrometry has allowed for broad characterization of individual proteoforms and mixtures of proteoforms from individual ions collected in Orbitrap mass spectrometers. In this study, we describe Theropod, a set of tools to perform Selective Temporal Overview of Resonant Ions (STORI) analysis from transients collected on an external digital oscilloscope. Using relatively wide charge correction, we are able to calculate the uncharged mass of ubiquitin, myoglobin, carbonic anhydrase, enolase and the Pierce Intact Protein Standard protein mixture. We can also identify post-translational modifications form the protein mixture and in the individual protein samples. |
| HostingRepository | MassIVE |
| AnnounceDate | 2026-01-12 |
| AnnouncementXML | Submission_2026-01-12_08:02:34.705.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Non peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Timothy Cleland |
| SpeciesList | scientific name: Equus caballus; common name: horse; NCBI TaxID: 9796; scientific name: Bos taurus; common name: cattle; NCBI TaxID: 9913; scientific name: Saccharomyces cerevisiae; common name: baker's yeast; NCBI TaxID: 4932; scientific name: Homo sapiens; common name: human; NCBI TaxID: 9606; |
| ModificationList | No PTMs are included in the dataset |
| Instrument | LTQ Orbitrap Elite |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2025-03-05 07:38:37 | ID requested | |
| ⏵ 1 | 2026-01-12 08:02:35 | announced |
Publication List
| no publication |
Keyword List
| submitter keyword: STORI, Charge-detection mass spectrometry, Intact protein, DatasetType:Proteomics |
Contact List
| Timothy Cleland | |
|---|---|
| contact affiliation | Smithsonian Institution |
| contact email | clelandtp@si.edu |
| lab head | |
| Timothy Cleland | |
| contact affiliation | Smithsonian Institution |
| contact email | clelandtp@si.edu |
| dataset submitter | |
Full Dataset Link List
| MassIVE dataset URI |
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive-ftp.ucsd.edu/v09/MSV000097240/ |
