PXD060534

PXD060534 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Activity-based protein profiling of beta-lactam targets in Mycobacterium tuberculosis
Description	Activity-based protein profiling data from Mycobacterium tuberculosis (Mtb) H37Rv grown under replicating and carbon-starvation conditions with beta lactam (meropenem) probe labeling or no probe control (npc). Proteins were obtained from Mtb cultures lysed by bead beating, digested with trypsin, and then analyzed by LC-MS/MS. Data was searched with MS-GF+ using PNNL's DMS processing pipeline.
HostingRepository	MassIVE
AnnounceDate	2025-08-08
AnnouncementXML	Submission_2025-08-08_14:54:54.717.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Matthew Monroe
SpeciesList	scientific name: Mycobacterium tuberculosis; NCBI TaxID: 1773;
ModificationList	Oxidation
Instrument	Q Exactive Plus; SYNAPT G2-Si

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2025-02-05 18:59:28	ID requested
⏵ 1	2025-08-08 14:54:55	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: proteomics, H37Rv, activity-based protein profiling, ABPP, DatasetType:Proteomics

submitter keyword: proteomics, H37Rv, activity-based protein profiling, ABPP, DatasetType:Proteomics

Contact List

Kimberly Beatty
contact affiliation	Oregon Health and Science University (OHSU)
contact email	beattyk@ohsu.edu
lab head
Matthew Monroe
contact affiliation	Pacific Northwest National Laboratory
contact email	matthew.monroe@pnnl.gov
dataset submitter

Full Dataset Link List

MassIVE dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive-ftp.ucsd.edu/v09/MSV000097053/

MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive-ftp.ucsd.edu/v09/MSV000097053/