PXD057366

PXD057366 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteomics profiling of human brain cortex for JUMPlib manuscript
Description	We generated a large TMT proteomics dataset to evaluate the performance of JUMPlib software (an integrative search tool combining fragment ion indexing with comprehensive TMT spectral libraries). This dataset consists of 40 LC-MS/MS fractions generated by the 16/18-plex TMT strategy from the human brain cortex, which were not utilized for the library generation.
HostingRepository	PRIDE
AnnounceDate	2024-11-04
AnnouncementXML	Submission_2024-11-04_03:34:05.544.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Zuo-Fei Yuan
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive HF

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-10-30 13:01:04	ID requested
⏵ 1	2024-11-04 03:34:05	announced

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

submitter keyword: mass spectrometry, JUMPlib software,TMT-based proteomics, human brain cortex

submitter keyword: mass spectrometry, JUMPlib software,TMT-based proteomics, human brain cortex

Contact List

Junmin Peng
contact affiliation	Department of Structural Biology and Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA
contact email	Junmin.peng@stjude.org
lab head
Zuo-Fei Yuan
contact affiliation	St. Jude Children's Research Hospital
contact email	zuo-fei.yuan@stjude.org
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/11/PXD057366
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/11/PXD057366

PRIDE project URI

Repository Record List

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