PXD046404
PXD046404 is an original dataset announced via ProteomeXchange.
Dataset Summary
Title | In-depth Profiling of 4-hydroxy-2-nonenal Modification via Reversible Thiazolidine Chemistry |
Description | Protein modification by lipid-derived electrophiles (LDEs) associates with various signaling pathways. Among these LDEs, HNE, is the most toxic and proteins modification of HNE have been linked to various diseases, including Alzheimer's and Parkinson's. However, due to their low abundance, in-depth profiling of HNEs modifications still presents challenges. This study introduces a novel strategy utilizing reversible thiazolidine chemistry to selectively capture HNE-modified proteins and palladium-mediated cleavage reaction to release them. Thousands of HNE-modified sites in different cell lines were identified. Combined with ABPP, we discovered a set of HNE-sensitive sites, offers a new tool for studying LDEs modifications in proteomes. |
HostingRepository | iProX |
AnnounceDate | 2023-10-26 |
AnnouncementXML | Submission_2023-10-25_18:51:47.743.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Jun Wang |
SpeciesList | scientific name: Homo sapiens; NCBI TaxID: 9606; |
ModificationList | No PTMs are included in the dataset |
Instrument | timsTOF Pro |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
---|---|---|---|
0 | 2023-10-25 18:51:36 | ID requested | |
⏵ 1 | 2023-10-25 18:51:48 | announced |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: HNE |
Contact List
Haojie Lu | |
---|---|
contact affiliation | Shanghai Cancer Center and Institutes of Biomedical Sciences, Fudan University |
contact email | luhaojie@fudan.edu.cn |
lab head | |
Jun Wang | |
contact affiliation | Department of Chemistry and Shanghai Cancer Center, Fudan University |
contact email | 21110220037@m.fudan.edu.cn |
dataset submitter |
Full Dataset Link List
iProX dataset URI |