PXD045454 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | The interactome of histone deacetylase HDA19 in dark-grown Arabidopsis seedlings |
Description | In this Data Report, we provide an immunoprecipitation (IP)-based analysis of the HDA19 interactome in etiolated Arabidopsis seedlings. We believe that the interactome presented here provides a valuable resource for follow-up research on novel interacting partners of this central protein. The material used for this experiment was derived from hypocotyls of 6-day-old etiolated Arabidopsis seedlings. The dataset contains a total of 6 files, 3 independent biological replicates of each Col-0 (control plants) and 35S::HDA19-GFP plants. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_06:03:27.829.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Chuan-Chih Hsu |
SpeciesList | scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702; |
ModificationList | No PTMs are included in the dataset |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2023-09-18 05:29:00 | ID requested | |
1 | 2023-09-18 19:21:40 | announced | |
⏵ 2 | 2024-10-22 06:03:28 | announced | 2024-10-22: Updated project metadata. |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: proteomics, histone acetylation, skotomorphogenesis, etiolated hypocotyl,immunoprecipitation, LC-MS/MS |
Contact List
Wolfgang Schmidt |
contact affiliation | Institute of Plant and Microbial Biology, Academia Sinica |
contact email | wosh@gate.sinica.edu.tw |
lab head | |
Chuan-Chih Hsu |
contact affiliation | Academia Sinica |
contact email | without1102@gmail.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/09/PXD045454 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD045454
- Label: PRIDE project
- Name: The interactome of histone deacetylase HDA19 in dark-grown Arabidopsis seedlings