PXD041035 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Identification and characterization of CC-AMP1-like and CC-AMP2-like peptides in Capsicum spp. |
Description | Antimicrobial peptides (AMPs) are compounds with a variety of bioactive properties. Especially promising are their antibacterial activities, often towards drug-resistant pathogens. Across different AMP sources, AMPs expressed within plants are relatively underexplored, with a limited number of plant AMP families identified. Recently, we identified the novel AMPs CC-AMP1 and CC-AMP2 in ghost pepper plants (Capsicum chinense x frutescens), exerting promising antibacterial activity and not classifying into any known plant AMP family. Herein, AMPs related to CC-AMP1 and CC-AMP2 were identified within both Capsicum annuum and Capsicum baccatum. Targeted MS/MS experiments were performed to determine peptide sequences, guided by in silico AMP sequence predictions. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_06:27:50.263.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Leslie Hicks |
SpeciesList | scientific name: Capsicum annuum; NCBI TaxID: 4072; scientific name: Capsicum baccatum; NCBI TaxID: 33114; |
ModificationList | 2-pyrrolidone-5-carboxylic acid; iodoacetamide derivatized residue |
Instrument | TripleTOF 5600; Q Exactive HF-X |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2023-03-22 14:34:55 | ID requested | |
1 | 2024-01-27 12:42:05 | announced | |
⏵ 2 | 2024-10-22 06:27:50 | announced | 2024-10-22: Updated project metadata. |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: Capsicum annuum,Mass Spectrometry, Capsicum baccatum, antimicrobial peptides |
Contact List
Leslie M. Hicks |
contact affiliation | Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States |
contact email | lmhicks@email.unc.edu |
lab head | |
Leslie Hicks |
contact affiliation | University of North Carolina at Chapel Hill |
contact email | lmhicks@unc.edu |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD041035
- Label: PRIDE project
- Name: Identification and characterization of CC-AMP1-like and CC-AMP2-like peptides in Capsicum spp.