PXD037804

PXD037804 is an original dataset announced via ProteomeXchange.

Title	Physiology of trans-translation deficiency in Bacillus subtilis – a comparative proteomics study
Description	trans-Translation is the most effective ribosome rescue system known in bacteria. While it is essential in some bacteria, Bacillus subtilis possesses two additional alternative ribosome rescue mechanisms that require the proteins BrfA or RqcH. To investigate the physiology of trans-translation deficiency in the model organism B. subtilis, we compared the proteomes of B. subtilis 168 and a ΔssrA mutant in mid-log phase using gel-free label-free quantitative proteomics.
HostingRepository	PRIDE
AnnounceDate	2023-06-30
AnnouncementXML	Submission_2023-06-30_08:34:36.462.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	MelissaVázquez-Hernández
SpeciesList	scientific name: Bacillus subtilis subsp. subtilis str. 168; NCBI TaxID: 224308;
ModificationList	No PTMs are included in the dataset
Instrument	Synapt MS

Revision	Datetime	Status	ChangeLog Entry
0	2022-10-28 07:26:14	ID requested
⏵ 1	2023-06-30 08:34:36	announced

Dataset with its publication pending

submitter keyword: LC-MSE,translation, gene regulation, bacteria, proteome

Julia E.Bandow
contact affiliation	Applied Microbiology, Faculty of Biology and Biotechnology, Ruhr University Bochum, 44892 Bochum, Germany
contact email	julia.bandow@rub.de
lab head
MelissaVázquez-Hernández
contact affiliation	Ruhr University Bochum
contact email	melissa.vazquez-hernandez@rub.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/06/PXD037804

PRIDE project URI

• PRIDE
  1. PXD037804
     1. Label: PRIDE project
     2. Name: Physiology of trans-translation deficiency in Bacillus subtilis – a comparative proteomics study