PXD034641

PXD034641 is an original dataset announced via ProteomeXchange.

Title	Effect of iron-limitation, elevated temperature and florfenicol antibiotics on the subcellular proteomes and the vesiculation of the fish pathogen Aeromonas salmonicida
Description	Here we analyzed the proteomic response of the important Gram-negative fish pathogen A. salmonicida to iron-limitation, the antibiotic florfenicol and an elevated incubation temperature. Proteins of different subcellular fractions (cytosol, inner membrane, outer membrane, extracellular and outer membrane vesicles) were enriched and analyzed.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_08:56:43.899.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Tobias Kroniger
SpeciesList	scientific name: Aeromonas salmonicida salmonicida; NCBI TaxID: 29491;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2022-06-19 04:46:52	ID requested
1	2022-08-30 08:22:31	announced
⏵ 2	2023-11-14 08:56:44	announced	2023-11-14: Updated project metadata.

Dataset with its publication pending

submitter keyword: proteomics, outer membrane vesicles, antibiotic,Aeromonas salmonicida

iron limitation

temperature, florfenicol, subcellular fractionation

Dörte Becher
contact affiliation	Institute of Microbiology, Department of Microbial Proteomics, Center for Functional Genomics of Microbes, University of Greifswald, 17489 Greifswald, Germany
contact email	dbecher@uni-greifswald.de
lab head
Tobias Kroniger
contact affiliation	Institute of Microbiology, Department of Microbial Proteomics, Center for Functional Genomics of Microbes, University of Greifswald
contact email	kronigert@uni-greifswald.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/08/PXD034641

PRIDE project URI

• PRIDE
  1. PXD034641
     1. Label: PRIDE project
     2. Name: Effect of iron-limitation, elevated temperature and florfenicol antibiotics on the subcellular proteomes and the vesiculation of the fish pathogen Aeromonas salmonicida