PXD034056 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | inSPIRE Spectral Rescoring Tool |
Description | inSPIRE is an open-source tool for spectral rescoring of mass spectrometry search results. For this project, inSPIRE was applied to MaxQuant, PEAKS DB, and Mascot search results from a tryptic digestion of the K562 proteome. Here we provide the RAW files and search results using MaxQuant, PEAKS DB, and Mascot. We also reprocessed RAW data from the PXD031709 and PXD031812 repositories for which we provide the search result files. Additionally, we provide PEAKS search results from RAW files from the PXD015489 repository which was used as training data for a predictor used within inSPIRE. Michele Mishto, Head of the research group Molecular Immunology at King’s College London and the Francis Crick Institute, London (UK). Email: michele.mishto@kcl.ac.uk, |
HostingRepository | PRIDE |
AnnounceDate | 2022-10-26 |
AnnouncementXML | Submission_2022-10-26_03:50:55.319.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | MicheleMishto |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Orbitrap Fusion |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2022-05-25 01:11:03 | ID requested | |
⏵ 1 | 2022-10-26 03:50:55 | announced | |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: Rescoring,Mass Spectrometry |
Contact List
JulianeLiepe |
contact affiliation | Head of research group Quantitative and Systems Biology; Max Planck Institute for Multidisciplinary Sciences; Goettingen (D); Germany |
contact email | jliepe@mpinat.mpg.de |
lab head | |
MicheleMishto |
contact affiliation | King's College London |
contact email | michele.mishto@kcl.ac.uk |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/10/PXD034056 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD034056
- Label: PRIDE project
- Name: inSPIRE Spectral Rescoring Tool