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PXD034056

PXD034056 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleinSPIRE Spectral Rescoring Tool
DescriptioninSPIRE is an open-source tool for spectral rescoring of mass spectrometry search results. For this project, inSPIRE was applied to MaxQuant, PEAKS DB, and Mascot search results from a tryptic digestion of the K562 proteome. Here we provide the RAW files and search results using MaxQuant, PEAKS DB, and Mascot. We also reprocessed RAW data from the PXD031709 and PXD031812 repositories for which we provide the search result files. Additionally, we provide PEAKS search results from RAW files from the PXD015489 repository which was used as training data for a predictor used within inSPIRE. Michele Mishto, Head of the research group Molecular Immunology at King’s College London and the Francis Crick Institute, London (UK). Email: michele.mishto@kcl.ac.uk,
HostingRepositoryPRIDE
AnnounceDate2022-10-26
AnnouncementXMLSubmission_2022-10-26_03:50:55.319.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterMicheleMishto
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListmonohydroxylated residue; iodoacetamide derivatized residue
InstrumentOrbitrap Fusion
Dataset History
RevisionDatetimeStatusChangeLog Entry
02022-05-25 01:11:03ID requested
12022-10-26 03:50:55announced
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: Rescoring,Mass Spectrometry
Contact List
JulianeLiepe
contact affiliationHead of research group Quantitative and Systems Biology; Max Planck Institute for Multidisciplinary Sciences; Goettingen (D); Germany
contact emailjliepe@mpinat.mpg.de
lab head
MicheleMishto
contact affiliationKing's College London
contact emailmichele.mishto@kcl.ac.uk
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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