<<< Full experiment listing

PXD033887

PXD033887 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleProteome of the wood decay fungus Fomitopsis pinicola is altered by substrate
DescriptionThe brown rot fungus, Fomitopsis pinicola strain FP-58527, was cultivated in media containing ground Populus tremuloides, Pinus taeda or Picea glauca wood as sole carbon source. Mass spectrometry analyses identified proteins likely involved in the degradation of lignocellulose. Patterns of enzymes detected varied with substrate.
HostingRepositoryPRIDE
AnnounceDate2022-06-08
AnnouncementXMLSubmission_2022-06-08_08:33:24.426.xml
DigitalObjectIdentifierhttps://dx.doi.org/10.6019/PXD033887
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportSupported dataset by repository
PrimarySubmitterGreg Sabat
SpeciesList scientific name: Fomitopsis pinicola; NCBI TaxID: 40483;
ModificationListmonohydroxylated residue; iodoacetamide derivatized residue; deamidated residue
InstrumentLTQ Orbitrap Elite
Dataset History
RevisionDatetimeStatusChangeLog Entry
02022-05-13 06:50:04ID requested
12022-06-08 08:33:24announced
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: Fomitopsis pinicola proteome, pine, spruce, aspen substrate, wood decay
Contact List
Dr. Daniel Cullen
contact affiliationInstitute for Microbial and Biochemical Sciences, USDA Forest Products Laboratory, Madison, WI
contact emaildaniel.cullen@wisc.edu
lab head
Greg Sabat
contact affiliationUniversity of Wisconsin
contact emailgsabat@wisc.edu
dataset submitter
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/06/PXD033887
PRIDE project URI
Repository Record List
[ + ]