PXD033887 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Proteome of the wood decay fungus Fomitopsis pinicola is altered by substrate |
Description | The brown rot fungus, Fomitopsis pinicola strain FP-58527, was cultivated in media containing ground Populus tremuloides, Pinus taeda or Picea glauca wood as sole carbon source. Mass spectrometry analyses identified proteins likely involved in the degradation of lignocellulose. Patterns of enzymes detected varied with substrate. |
HostingRepository | PRIDE |
AnnounceDate | 2022-06-08 |
AnnouncementXML | Submission_2022-06-08_08:33:24.426.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD033887 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Greg Sabat |
SpeciesList | scientific name: Fomitopsis pinicola; NCBI TaxID: 40483; |
ModificationList | monohydroxylated residue; iodoacetamide derivatized residue; deamidated residue |
Instrument | LTQ Orbitrap Elite |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2022-05-13 06:50:04 | ID requested | |
⏵ 1 | 2022-06-08 08:33:24 | announced | |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: Fomitopsis pinicola proteome, pine, spruce, aspen substrate, wood decay |
Contact List
Dr. Daniel Cullen |
contact affiliation | Institute for Microbial and Biochemical Sciences, USDA Forest Products Laboratory, Madison, WI |
contact email | daniel.cullen@wisc.edu |
lab head | |
Greg Sabat |
contact affiliation | University of Wisconsin |
contact email | gsabat@wisc.edu |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/06/PXD033887 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD033887
- Label: PRIDE project
- Name: Proteome of the wood decay fungus Fomitopsis pinicola is altered by substrate