PXD033586

PXD033586 is an original dataset announced via ProteomeXchange.

Title	The marine Bacteroidetes Muricauda sp. MAR_2010_75 digests diatom β-mannan
Description	The polysaccharide β-mannan, which is common in terrestrial plants but unknown in microalgae, was recently detected during diatom blooms. We identified a β-mannan polysaccharide utilization locus (PUL) in the genome of the marine Flavobacterium Muricauda sp. MAR_2010_75 which resembles PULs in bacteria from diverse ecosystems. Proteomics showed the β-mannan induced translation of 22 proteins encoded within the PUL.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_08:56:50.127.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Irena Beidler
SpeciesList	scientific name: Muricauda sp. MAR_2010_75; NCBI TaxID: 1250232;
ModificationList	monohydroxylated residue
Instrument	LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2022-05-04 09:14:16	ID requested
1	2022-11-24 05:34:39	announced
⏵ 2	2023-11-14 08:56:50	announced	2023-11-14: Updated project metadata.

Dataset with its publication pending

submitter keyword: Marine Bacteroidetes, Polysaccharide degradation, Muricauda,β-mannan, Subproteome

Thomas Schweder
contact affiliation	University of Greifswald, Insititute of Pharmacy, Department Pharmaceutical Biotechnology
contact email	schweder@uni-greifswald.de
lab head
Irena Beidler
contact affiliation	University of Greifswald, Department Pharmaceutical Biotechnology
contact email	irena.beidler@uni-greifswald.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/11/PXD033586

PRIDE project URI

• PRIDE
  1. PXD033586
     1. Label: PRIDE project
     2. Name: The marine Bacteroidetes Muricauda sp. MAR_2010_75 digests diatom β-mannan