PXD033452

PXD033452 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	SARS-CoV-2 proteins BioID in HEK293
Description	SARS-CoV-2 proteins orchestrate complex mechanisms that underlie SARS-CoV-2 infection and COVID-19 causing pathogenic processes. Here we have exhaustively defined human proteins in spatial proximity (proximal interaction network) of 27/28 SARS-CoV-2 proteins in human cells by proximity-dependent biotinylation (BioID)-based approach. We report 10,185 high-confidence virus-host PPI involving 2,592 unique cellular targets.
HostingRepository	PRIDE
AnnounceDate	2025-03-07
AnnouncementXML	Submission_2025-03-07_09:41:32.942.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Etienne Coyaud
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	acetylated residue; monohydroxylated residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-04-25 04:27:39	ID requested
⏵ 1	2025-03-07 09:41:33	announced

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

ProteomeXchange project tag: Sars-cov-2, Covid-19
submitter keyword: BioID, human, SARS-CoV-2, Proximal interactomics

ProteomeXchange project tag: Sars-cov-2, Covid-19

submitter keyword: BioID, human, SARS-CoV-2, Proximal interactomics

Contact List

Etienne COYAUD
contact affiliation	Univ. Lille, Inserm, CHU Lille, U1192 - Protéomique Réponse Inflammatoire Spectrométrie de Masse - PRISM, F-59000 Lille, France
contact email	etienne.coyaud@inserm.fr
lab head
Etienne Coyaud
contact affiliation	Univ. Lille, Inserm, CHU Lille, U1192 - Protéomique Réponse Inflammatoire Spectrométrie de Masse - PRISM, F-59000 Lille, France
contact email	etienne.coyaud@inserm.fr
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/03/PXD033452
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/03/PXD033452

PRIDE project URI

Repository Record List

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