PXD032877

PXD032877 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Hepatic protein and phosphoprotein signatures of alcohol-associated cirrhosis and hepatitis
Description	LC-MS/MS tryptic peptide data comprising TMT10 analysis of both global and phosphoproteome of alcoholic hepatitis liver with relevant controls. Two sets of data include both explant liver samples and liver biopsy data. Data was searched with MS-GF+.
HostingRepository	MassIVE
AnnounceDate	2022-08-16
AnnouncementXML	Submission_2022-08-16_10:55:17.618.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Matthew Monroe
SpeciesList	scientific name: Homo sapiens; common name: human; NCBI TaxID: 9606;
ModificationList	TMT6plex; Carbamidomethyl; Oxidation; Phospho
Instrument	Orbitrap Fusion Lumos; Q Exactive Plus

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-03-30 21:34:27	ID requested
⏵ 1	2022-08-16 10:55:18	announced

Publication List

Josiah Hardesty, Le Day, Jeffrey Warner, Dennis Warner, Marina Gritsenko, Aliya Asghar, Andrew Stolz, Timothy Morgan, Craig McClain, Jon Jacobs, Irina Kirpich. Hepatic Protein and Phosphoprotein Signatures of Alcohol-Associated Cirrhosis and Hepatitis. American Journal of Pathology. 2022 Jul
192(7): 1066-1082. https://doi.org/10.1016/j.ajpath.2022.04.004.

Josiah Hardesty, Le Day, Jeffrey Warner, Dennis Warner, Marina Gritsenko, Aliya Asghar, Andrew Stolz, Timothy Morgan, Craig McClain, Jon Jacobs, Irina Kirpich. Hepatic Protein and Phosphoprotein Signatures of Alcohol-Associated Cirrhosis and Hepatitis. American Journal of Pathology. 2022 Jul

192(7): 1066-1082. https://doi.org/10.1016/j.ajpath.2022.04.004.

Keyword List

submitter keyword: Alcoholic Hepatitis, phosphoproteome, Liver Disease

submitter keyword: Alcoholic Hepatitis, phosphoproteome, Liver Disease

Contact List

Jon Jacobs
contact affiliation	Pacific Northwest National Laboratory
contact email	Jon.Jacobs@pnnl.gov
lab head
Matthew Monroe
contact affiliation	Pacific Northwest National Laboratory
contact email	matthew.monroe@pnnl.gov
dataset submitter

Full Dataset Link List

MassIVE dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000089168/

MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000089168/