PXD032215

PXD032215 is an original dataset announced via ProteomeXchange.

Title	Quantitative proteomic analysis of whole protein in three melanoma samples of 92.1, 92.1-A and 92.1-B
Description	A total of 6081 proteins were identified in this study, of which 5267 proteins contained quantitative information. If taking 1.2 times as the change threshold and t-test p-value < 0.05 as the standard, the expression of 335 proteins in 92.1-a / 92.1 comparison group was up-regulated and 302 proteins were down regulated; In the 92.1-b / 92.1 comparison group, 129 proteins were up-regulated and 160 proteins were down regulated. Based on the above data, we conducted a systematic bioinformatics analysis of proteins containing quantitative information, including protein annotation, functional classification, functional enrichment and cluster analysis based on functional enrichment. It provides a comprehensive reference for the downstream proteome research.
HostingRepository	PRIDE
AnnounceDate	2022-03-21
AnnouncementXML	Submission_2022-03-21_03:13:57.498.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Xifeng Fei
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Fusion Lumos

Revision	Datetime	Status	ChangeLog Entry
0	2022-03-11 09:54:50	ID requested
⏵ 1	2022-03-21 03:13:57	announced

Dataset with its publication pending

ProteomeXchange project tag: Cancer (B/D-HPP), Biology/Disease-Driven Human Proteome Project (B/D-HPP), Human Proteome Project

submitter keyword: 92.1 cells, 92.1-A and 92.1-B cells, proteomic analysis, p62 protein, orthotopic and ectopic transplantation models of uveal melanoma

Zhimin Wang
contact affiliation	Department of Neurosurgery, Suzhou Kowloon Hospital, Shanghai Jiaotong University School of Medicine, 118 Wanshen Street, Suzhou, China.
contact email	feisitian@126.com
lab head
Xifeng Fei
contact affiliation	suzhou kowloon hospital,Shanghai Jiaotong University School of Medicine
contact email	41356944@qq.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/03/PXD032215

PRIDE project URI

• PRIDE
  1. PXD032215
     1. Label: PRIDE project
     2. Name: Quantitative proteomic analysis of whole protein in three melanoma samples of 92.1, 92.1-A and 92.1-B