PXD030012

PXD030012 is an original dataset announced via ProteomeXchange.

Title	Detection SARS-CoV-2 infection in mice by ATR-FTIR
Description	Vero-E6 cell supernatant, mice lavage and human saliva were evaulated after exposure to SARS-CoV-2 via ATR-FTIR spectoscopy. To provide further information about the physiological response, proteins contained in the mouse lavage were assessed via shotgun proteomics (data shown here). Mice were exposed to active SARS-CoV-2 or UV-inactivated SARS-CoV-2 for up to 4 days, lavage collected at day 0, day 2 and day 4 (D4). Lavage proteins were pooled for day 0 (due to low protein abundance) and compared to UV-I-SARS-CoV-2(n=4)and SARS-CoV-2(n=8)samples.
HostingRepository	PRIDE
AnnounceDate	2021-12-17
AnnouncementXML	Submission_2021-12-16_22:49:55.952.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Harley Robinson
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2021-11-28 05:58:43	ID requested
⏵ 1	2021-12-16 22:49:56	announced

Dataset with its publication pending

submitter keyword: SARS-CoV-2, COVID-19, FTIR

Michelle M. Hill
contact affiliation	QIMR Berghofer Medical Research Institute
contact email	michelle.hill@qimrberghofer.edu.au
lab head
Harley Robinson
contact affiliation	QIMR Berghofer Medical Research Institute
contact email	Harley.robinson@uqconnect.edu.au
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/12/PXD030012

PRIDE project URI

• PRIDE
  1. PXD030012
     1. Label: PRIDE project
     2. Name: Detection SARS-CoV-2 infection in mice by ATR-FTIR