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PXD025652

PXD025652 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleEvaluation of fully functionalized diazirine tags for chemical proteomic applications
DescriptionThe use of photo-affinity labeling (PAL) reagents for the mapping of noncovalent small molecule-protein interactions has become widespread. Recently, several ‘fully-functionalized’ (FF) chemical tags have been developed wherein a photoactivatable capture group, an enrichment handle, and a functional group for synthetic conjugation to a molecule of interest are integrated into a single modular tag. Diazirine-based FF tags in particular are increasingly employed in chemical proteomic investigations, however, despite routine usage, their relative utility has not been established. Here, we systematically evaluate several diazirine-containing FF tags, including a terminal diazirine analog developed herein, for chemical proteomic investigations. Specifically, we compared the general reactivity of five diazirine tags and assessed their impact on the profiles of various small molecules, including fragments and known inhibitors revealing that such tags can have profound effects on the proteomic profiles of chemical probes. Our findings should be informative for chemical probe design, PAL-reagent development, and chemical proteomic investigations.
HostingRepositoryPRIDE
AnnounceDate2021-05-11
AnnouncementXMLSubmission_2021-05-10_22:16:54.592.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterLouis Conway
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListNo PTMs are included in the dataset
InstrumentOrbitrap Fusion Lumos
Dataset History
RevisionDatetimeStatusChangeLog Entry
02021-04-27 08:18:33ID requested
12021-05-10 22:16:54announced
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: photoaffinity, fully-functionlalized, diazirine
Contact List
Christopher G Parker
contact affiliationDepartment of Chemistry The Scripps Research Institute Jupiter FL, USA
contact emailcparker@scripps.edu
lab head
Louis Conway
contact affiliationScripps Research
contact emaillconway@scripps.edu
dataset submitter
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