PXD025586

PXD025586 is an original dataset announced via ProteomeXchange.

Title	Proteome analysis of Renibacterium salmoninarum reveals putative role of membrane vesicles in virulence
Description	This study used subcellular fractionation combined with proteomics for a comprehensive overview of the protein localizations of R. salmoninarum proteins within enriched subcellular fractions of cytosolic, membrane, extracellular and membrane vesicle (MV) proteins. With this approach, 1,674 protein groups were label-free quantified and the abundance of proteins involved in virulence processes were compared between the subcellular fractions.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_08:52:21.232.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Tobias Kroniger
SpeciesList	scientific name: Renibacterium salmoninarum ATCC 33209; NCBI TaxID: 288705;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2021-04-23 06:20:08	ID requested
1	2022-02-24 04:29:25	announced
⏵ 2	2023-11-14 08:52:21	announced	2023-11-14: Updated project metadata.

Dataset with its publication pending

submitter keyword: Microbiology, Membrane vesicles,Proteomics, Mass spectrometry, Renibacterium salmoninarum

Dörte Becher
contact affiliation	Institute of Microbiology, Department of Microbial Proteomics, Center for Functional Genomics of Microbes, University of Greifswald, 17489 Greifswald, Germany
contact email	dbecher@uni-greifswald.de
lab head
Tobias Kroniger
contact affiliation	Institute of Microbiology, Department of Microbial Proteomics, Center for Functional Genomics of Microbes, University of Greifswald
contact email	kronigert@uni-greifswald.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/02/PXD025586

PRIDE project URI

• PRIDE
  1. PXD025586
     1. Label: PRIDE project
     2. Name: Proteome analysis of Renibacterium salmoninarum reveals putative role of membrane vesicles in virulence