PXD025385

PXD025385 is an original dataset announced via ProteomeXchange.

Title	DIAmeter: Matching peptides to data-independent acquisition mass spectrometry data
Description	This dataset consists of three mass spectrometry experiments where different isolation window sizes were explored in combination with gas phase fractionation, using a yeast lysate with selective oxidation of methionine. The resulting DIA data, as .raw files, include (1) one run covering the 400--1200 m/z mass range acquired using 20 m/z isolation windows; (2) two runs acquired using 10 m/z isolation windows to cover 400--800 and 800--1200 m/z mass ranges; (3) four runs acquired using 5 m/z isolation windows covering 400--600, 600--800, 800--1000, and 1000--1200 m/z ranges, respectively.
HostingRepository	PRIDE
AnnounceDate	2021-05-31
AnnouncementXML	Submission_2021-05-31_07:43:42.020.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Yang Lu
SpeciesList	scientific name: Saccharomyces cerevisiae (Baker's yeast); NCBI TaxID: 4932;
ModificationList	monohydroxylated residue
Instrument	TripleTOF 5600; Orbitrap Fusion

Revision	Datetime	Status	ChangeLog Entry
0	2021-04-14 01:56:32	ID requested
⏵ 1	2021-05-31 07:43:42	announced

Dataset with its publication pending

submitter keyword: yeast

William Stafford Noble
contact affiliation	University of Washington
contact email	william-noble@uw.edu
lab head
Yang Lu
contact affiliation	University of Washington
contact email	ylu465@uw.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/05/PXD025385

PRIDE project URI

• PRIDE
  1. PXD025385
     1. Label: PRIDE project
     2. Name: DIAmeter: Matching peptides to data-independent acquisition mass spectrometry data