PXD023998

PXD023998 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Uropathogenic Escherichia coli biofilm proteomics
Description	We previously determined that loss of respiratory quinol oxidase cytochrome bd disrupts biofilm formation in uropathogenic Escherichia coli (UPEC). In this study, we extracted and interrogated the outer membrane and extracellular matrix of colony biofilms formed by UPEC isolate UTI89 and an isogenic mutant lacking cytochrome bd (∆cydAB).
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:20:39.900.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Connor Beebout
SpeciesList	scientific name: Escherichia coli; NCBI TaxID: 562;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive HF

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-02-04 22:35:17	ID requested
1	2021-04-01 02:21:15	announced
⏵ 2	2024-10-22 05:20:40	announced	2024-10-22: Updated project metadata.

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

submitter keyword: Escherichia coli, biofilm,UPEC

submitter keyword: Escherichia coli, biofilm,UPEC

Contact List

Maria Hadjifrangiskou
contact affiliation	Department of Pathology, Microbiology, and Immunology; Vanderbilt University Medical Center; Nashville, TN, USA
contact email	maria.hadjifrangiskou@vumc.org
lab head
Connor Beebout
contact affiliation	Vanderbilt University
contact email	connor.j.beebout@vanderbilt.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/04/PXD023998
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/04/PXD023998

PRIDE project URI

Repository Record List

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