PXD022225 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Combining mass spectrometry and machine learning to discover bioactive peptides |
Description | Mammalien peptidome map using seven metabolic active tissues and four different strains. 150.000+ identified peptides. Machine learning applied to score peptides based on similarity to known peptides. Functional validation of high scoring peptides. |
HostingRepository | PRIDE |
AnnounceDate | 2023-11-14 |
AnnouncementXML | Submission_2023-11-14_08:51:34.867.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Christian Madsen |
SpeciesList | scientific name: Mus musculus (Mouse); NCBI TaxID: 10090; |
ModificationList | amidated residue; 2-pyrrolidone-5-carboxylic acid (Glu); acetylated residue; monohydroxylated residue |
Instrument | Q Exactive HF; Q Exactive; Q Exactive Plus |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2020-10-28 05:55:10 | ID requested | |
1 | 2022-10-20 23:00:41 | announced | |
⏵ 2 | 2023-11-14 08:51:35 | announced | 2023-11-14: Updated project metadata. |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: peptidomics, tissues,Mouse, bioactive peptides, peptidome |
Contact List
Mads Grønborg |
contact affiliation | Novo Nordisk A/S Translational Technologies (Dept. 6905) Novo Nordisk Park 1 DK-2760 Måløv Denmark |
contact email | mdgr@novonordisk.com |
lab head | |
Christian Madsen |
contact affiliation | Global Research Technologies, Novo Nordisk A/S, Maaloev, Denmark. |
contact email | ctom@novonordisk.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/10/PXD022225 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD022225
- Label: PRIDE project
- Name: Combining mass spectrometry and machine learning to discover bioactive peptides