PXD021076 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Proteomics profiling of pediatric choroid plexus tumors |
Description | Aggresome is a para nuclear inclusion body that functions as a storage compartment for misfolded proteins. Our previous work revealed the presence of aggresomes in pediatric choroid plexus tumors (CPT). CPTs are rare neoplasms comprised of three pathological subgroups; choroid plexus carcinoma (CPC), a grade III tumor, atypical choroid plexus papilloma (ACPP), a grade II tumor, and choroid plexus papilloma (CPP), a grade I tumor. In the current study, we aimed to investigate the prognostic value of aggresomes-positivity and its correlation to the pathological and molecular subtypes. The proteomics profiling of 21 CPT pediatric samples was investigated using ABSciex Triple TOF 5600+ mass spectrometer. |
HostingRepository | PRIDE |
AnnounceDate | 2021-02-11 |
AnnouncementXML | Submission_2021-02-11_01:05:49.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD021076 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Nouran Al-Shehaby |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue; deamidated residue |
Instrument | TripleTOF 5600 |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2020-08-24 02:38:47 | ID requested | |
⏵ 1 | 2021-02-11 01:05:49 | announced | |
Publication List
Dataset with its publication pending |
Keyword List
ProteomeXchange project tag: Biology/Disease-Driven Human Proteome Project (B/D-HPP), Human Proteome Project |
submitter keyword: Human, Pediatric, Cancer, Tumor, Choroid Plexus, Tissue, Pappiloma, Atypical, Carcinoma |
Contact List
Shahenda Mahmoud El-Naggar |
contact affiliation | Tumor Biology Research Program, Basic Research Unit, Research Department, Children's Cancer Hospital Egypt 57357 |
contact email | shahenda.elnaggar@57357.org |
lab head | |
Nouran Al-Shehaby |
contact affiliation | Children's Cancer Hospital Egypt 57357 |
contact email | nouran.alshehaby@57357.org |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/02/PXD021076 |
PRIDE project URI |
Repository Record List
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- PRIDE
- PXD021076
- Label: PRIDE project
- Name: Proteomics profiling of pediatric choroid plexus tumors