PXD019900 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Grad-seq shines light on unrecognized RNA and protein complexes in the model bacterium Escherichia coli |
Description | 22 total proteome samples from E. coli wild type resolved on a glycerol gradient resulting in 20 fractions and a pellet fraction. A lysate sample is given as input control. Further, 2 affinity purification samples comparing YggL-3xFLAG pulldown vs. the wild type is given. In this case, each sample was run on a gel and the lanes cut into 15 gel pieces each. |
HostingRepository | PRIDE |
AnnounceDate | 2020-08-10 |
AnnouncementXML | Submission_2020-08-10_01:50:01.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Jens Hör |
SpeciesList | scientific name: Escherichia coli; NCBI TaxID: 562; |
ModificationList | No PTMs are included in the dataset |
Instrument | Orbitrap Fusion |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2020-06-19 03:06:19 | ID requested | |
⏵ 1 | 2020-08-10 01:50:01 | announced | |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: Grad-seq, sRNA, RBP, interactome, complexome |
Contact List
Jörg Vogel |
contact affiliation | Helmholtz Institute for RNA-based Infection Research (HIRI), Helmholtz Centre for Infection Research (HZI), D-97080 Würzburg, Germany Institute of Molecular Infection Biology, University of Würzburg, D-97080 Würzburg, Germany |
contact email | joerg.vogel@uni-wuerzburg.de |
lab head | |
Jens Hör |
contact affiliation | University of Würzburg |
contact email | jens.hoer@uni-wuerzburg.de |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/08/PXD019900 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD019900
- Label: PRIDE project
- Name: Grad-seq shines light on unrecognized RNA and protein complexes in the model bacterium Escherichia coli