PXD019045 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Human HCC sample, phosphosites occupancy |
Description | Improve the reliability of the phosphosite occupancy determined by the third method by comparison of the ratio of absolute occupancy and relative occupancy from HCC samples. An outlier score was introduced to evaluate the deviation between ratio of absolute occupancy and relative occupancy and further to balance the confidence interval and deviation instead of set a fixed threshold. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_05:10:16.481.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Wang Yan |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | phosphorylated residue |
Instrument | Q Exactive HF |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2020-05-07 22:29:33 | ID requested | |
1 | 2020-08-05 22:51:18 | announced | |
⏵ 2 | 2024-10-22 05:10:16 | announced | 2024-10-22: Updated project metadata. |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: QE-HF, phosphoproteome,deep covered human HCC proteome |
Contact List
Wang Yan |
contact affiliation | Dalian institute of chemical physics, CAS |
contact email | wangyan805@outlook.com |
lab head | |
Wang Yan |
contact affiliation | Dalian institute of chemical physics, CAS |
contact email | wangyan805@outlook.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD019045
- Label: PRIDE project
- Name: Human HCC sample, phosphosites occupancy