PXD017419

PXD017419 is an original dataset announced via ProteomeXchange.

Title	Thermal proteome profiling on zebrafish using napabucasin
Description	In this project we performed thermal proteome profiling experiments on zebrafish embryos with the drug napabucasin. The lysate was heat treated, TMT labelled and subsuquently high pH fractionated.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:14:25.172.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Niels Leijten
SpeciesList	scientific name: Danio rerio (Zebrafish) (Brachydanio rerio); NCBI TaxID: 7955;
ModificationList	iodoacetamide derivatized residue
Instrument	Q Exactive HF

Revision	Datetime	Status	ChangeLog Entry
0	2020-02-06 08:03:19	ID requested
1	2020-10-29 04:46:01	announced
⏵ 2	2024-10-22 05:14:25	announced	2024-10-22: Updated project metadata.

Dataset with its publication pending

submitter keyword: Thermal proteome profiling, TMT, zebrafish

Simone Lemeer
contact affiliation	Biomolecular Mass Spectrometry and Proteomics Bijvoet Center for Biomolecular Research Utrecht University
contact email	s.m.lemeer@uu.nl
lab head
Niels Leijten
contact affiliation	Utrecht University
contact email	n.m.leijten@uu.nl
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/10/PXD017419

PRIDE project URI

• PRIDE
  1. PXD017419
     1. Label: PRIDE project
     2. Name: Thermal proteome profiling on zebrafish using napabucasin